Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015904381.1_cds_XP_016454534.1_48551
CDS Infomation

[gene=LOC107778748] [db_xref=GeneID:107778748] [protein=uncharacterized calcium-binding protein At1g02270-like isoform X3] [protein_id=XP_016454534.1] [location=join(101907..102041,102146..102244,102374..102479,103431..103651,103771..103847,103944..104052,104157..104282,105612..105722,105874..105981,106352..106594)] [gbkey=CDS]
Sequence

ATGGGAAGGAAGAATAGAGGAACAACGAAAGGGAGAGTTTCACGAATTGGAAGCTATGCT
ATTGCCGAACCCAATTCAATTTCTTGTACCACTTTTAATATTCTCGCGCCCATTTATAAA
AGACTCAATCTTGAGAGTTGCAGAGAAAGCGATTATAGGGCAAATTGGCTGAGCAGGAAT
CATAGGATATTGGATTGGTTGTTGTACGAGAGGTCTTCCATTATTTGTCTTCAGGAATTC
TGGGTTGGGAATGAAGAGCTTGTTGGTATATATGACAAGAGGCTAGGAGATGCAGGATAT
ATTAATTTCAAGCTTGCTCGAACCAATAATCGTGGTGATGGTCTGCTGACTGCCATTCAT
AAGGACTACTTCAGGGTTATAGCCCACAGAGAGTTGCTTTTCAATGATTTTGGAGATCGT
GTTGCTCAACTATTGCATGTTGAACTAATTGCACCTTATGCACAATGTCGAAACAATAAT
GTTCGGCAAGAAATGCTGATAGTGAACACACACCTTTTGTTTCCTCATGATTCAAGCTTG
TCTTTGGAACGACTGCGGCAGGTCTACAAGATATTGCAATATGTGGAATCATATCAGAAA
GAAAATAAGCTTAATCCCTTGCCAATTATTCTGTGCGGTGACTGGAACGGAAGCAAGCGC
GGCCATGTTTACAAATTTCTCAGATCTCAAGGATTTGTATCATCATATGATACTGCTCAC
CAATACACTGATGCTGATGCACACAAGTGGGTGAGCCACCGTAACCACCGTGGGAACATC
TGTGGTGTGGATTTTATATGGCTTTTAAATCCAAATAGCTACAGGAAATTGCTGAAAACA
AGTTGGGGAAATGCAATTTTTGGAATGTTCAAGTATCAACTTCGCCGAGCCTCGTTGACT
GAGAATGACGCGTTTGCTTTTCTCAAAGCTGACAGCGATGGTGATTACATTACGTATGCT
GGGTTTTGTGAAGCGCTCCGTCAGCTTAATCTGATTGGACATTGCTATGGGCTGAGTGCT
GAGGAAATAAAGGATTTGTGGTTGCAAGCAGACATTGATGGAAATGGAGTTCTTGATTAC
AGTGAATTTCAGCAGCAGCGGGTATGGAATCGTACATGGTCAGAGCAAAGAGATGGAGAA
AACGATGAGGCATGGGACGACGATGTTGTTAGTGATACCGAAGAAACAATTGGTTTTAGT
GTCAAGAATGCAGTTCTGTTCCCCACAGAAGTTGAGAAAGGAACATGGCCTGAAGATTAT
TCACTTTCTGATCACGCCAAACTCACTGTGGTATTTTCACCTGTAAGAATGTTATGCTGT
CAATTGTCCCGATAG

Peptide Sequence

PEP ID

XP_016454534.1
PEP Infomation

PREDICTED: uncharacterized calcium-binding protein At1g02270-like isoform X3 [Nicotiana tabacum]
Sequence

MGRKNRGTTKGRVSRIGSYAIAEPNSISCTTFNILAPIYKRLNLESCRESDYRANWLSRN
HRILDWLLYERSSIICLQEFWVGNEELVGIYDKRLGDAGYINFKLARTNNRGDGLLTAIH
KDYFRVIAHRELLFNDFGDRVAQLLHVELIAPYAQCRNNNVRQEMLIVNTHLLFPHDSSL
SLERLRQVYKILQYVESYQKENKLNPLPIILCGDWNGSKRGHVYKFLRSQGFVSSYDTAH
QYTDADAHKWVSHRNHRGNICGVDFIWLLNPNSYRKLLKTSWGNAIFGMFKYQLRRASLT
ENDAFAFLKADSDGDYITYAGFCEALRQLNLIGHCYGLSAEEIKDLWLQADIDGNGVLDY
SEFQQQRVWNRTWSEQRDGENDEAWDDDVVSDTEETIGFSVKNAVLFPTEVEKGTWPEDY
SLSDHAKLTVVFSPVRMLCCQLSR

Transcript Sequence

Gene sequence data has not been registered.